Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AC025048.3-201ENST00000590609 569 ntBASIC16.87■□□□□ 0.29
NOTCH4Q99466 AC005702.4-201ENST00000618393 416 ntBASIC16.87■□□□□ 0.29
NOTCH4Q99466 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 HLA-A-202ENST00000376806 1854 ntBASIC16.86■□□□□ 0.29
NOTCH4Q99466 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 RPSAP52-203ENST00000622976 1023 ntBASIC16.86■□□□□ 0.29
NOTCH4Q99466 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH4Q99466 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 TTTY23B-201ENST00000442790 549 ntBASIC16.86■□□□□ 0.29
NOTCH4Q99466 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 EEF1DP4-201ENST00000446006 880 ntBASIC16.86■□□□□ 0.29
NOTCH4Q99466 AC123567.1-201ENST00000548294 1261 ntBASIC16.86■□□□□ 0.29
NOTCH4Q99466 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.86■□□□□ 0.29
NOTCH4Q99466 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 RPS2P32-201ENST00000439199 892 ntBASIC16.85■□□□□ 0.29
NOTCH4Q99466 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 AL139010.1-201ENST00000454878 894 ntBASIC16.85■□□□□ 0.29
NOTCH4Q99466 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 AC026979.3-201ENST00000607315 403 ntBASIC16.85■□□□□ 0.29
NOTCH4Q99466 WFDC1-204ENST00000613603 549 ntBASIC16.85■□□□□ 0.29
NOTCH4Q99466 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH4Q99466 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 CYP4F24P-201ENST00000586049 1580 ntBASIC16.85■□□□□ 0.29
NOTCH4Q99466 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH4Q99466 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms