Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 GPS2P2-201ENST00000430745 888 ntBASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 FAM86GP-201ENST00000448322 971 ntBASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 AC098859.1-201ENST00000502915 1238 ntBASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 AC109322.1-201ENST00000524499 1264 ntBASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ALG1L8P-201ENST00000533887 760 ntBASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 HLA-H-201ENST00000383620 1096 ntBASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 AC069262.1-201ENST00000539058 672 ntBASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 AC026150.2-201ENST00000564693 1156 ntBASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 AC027796.2-201ENST00000575326 344 ntBASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 GGT4P-201ENST00000623672 1708 ntBASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 LINC01144-201ENST00000626198 1710 ntBASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK5RAP1Q96SZ6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms