Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 SPDYE12P-201ENST00000618416 771 ntBASIC16.61■□□□□ 0.25
SIPA1Q96FS4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 AL035456.1-201ENST00000456064 1369 ntBASIC16.61■□□□□ 0.25
SIPA1Q96FS4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 FAM220BP-201ENST00000377689 816 ntBASIC16.6■□□□□ 0.25
SIPA1Q96FS4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.6■□□□□ 0.25
SIPA1Q96FS4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.6■□□□□ 0.25
SIPA1Q96FS4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 AL138828.2-201ENST00000615812 383 ntBASIC16.6■□□□□ 0.25
SIPA1Q96FS4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 AC011270.2-201ENST00000624293 2550 ntBASIC16.6■□□□□ 0.25
SIPA1Q96FS4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIPA1Q96FS4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.59■□□□□ 0.25
SIPA1Q96FS4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AC005034.1-201ENST00000426657 489 ntBASIC16.59■□□□□ 0.25
SIPA1Q96FS4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 HLA-V-204ENST00000476601 1289 ntBASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AC098859.1-201ENST00000502915 1238 ntBASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.59■□□□□ 0.25
SIPA1Q96FS4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms