Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 IGLL3P-201ENST00000412472 434 ntBASIC16.91■□□□□ 0.3
RTP4Q96DX8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.91■□□□□ 0.3
RTP4Q96DX8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 AL031055.1-201ENST00000606362 631 ntBASIC16.91■□□□□ 0.3
RTP4Q96DX8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 PMS2P4-201ENST00000412466 1052 ntBASIC16.9■□□□□ 0.3
RTP4Q96DX8 BX842568.4-201ENST00000421222 227 ntBASIC16.9■□□□□ 0.3
RTP4Q96DX8 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 AC098831.1-202ENST00000438821 336 ntBASIC16.9■□□□□ 0.3
RTP4Q96DX8 VN2R19P-201ENST00000442399 1052 ntBASIC16.9■□□□□ 0.3
RTP4Q96DX8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 AL031432.2-201ENST00000566714 459 ntBASIC16.9■□□□□ 0.3
RTP4Q96DX8 AL928711.1-201ENST00000570165 459 ntBASIC16.9■□□□□ 0.3
RTP4Q96DX8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.9■□□□□ 0.3
RTP4Q96DX8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTP4Q96DX8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.89■□□□□ 0.3
RTP4Q96DX8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTP4Q96DX8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RTP4Q96DX8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RTP4Q96DX8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RTP4Q96DX8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.89■□□□□ 0.3
RTP4Q96DX8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 MIR1233-2-201ENST00000408138 82 ntBASIC16.89■□□□□ 0.29
RTP4Q96DX8 MIR1233-1-201ENST00000408722 82 ntBASIC16.89■□□□□ 0.29
RTP4Q96DX8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 AC009947.1-201ENST00000444350 727 ntBASIC16.89■□□□□ 0.29
RTP4Q96DX8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 MIR4751-201ENST00000578027 74 ntBASIC16.89■□□□□ 0.29
RTP4Q96DX8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTP4Q96DX8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms