Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GOLGA2P4-201ENST00000441462 777 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AL139010.1-201ENST00000454878 894 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 MIR5189-201ENST00000577370 114 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AL139099.5-201ENST00000635274 300 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 AC005229.1-201ENST00000392885 409 ntBASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 HIST3H2BA-201ENST00000436555 524 ntBASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 RN7SL399P-201ENST00000471648 279 ntBASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 MIR3615-201ENST00000581999 87 ntBASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM43Q96BQ3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 AC004408.2-201ENST00000623613 2777 ntBASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 ACTG1P3-201ENST00000431775 1114 ntBASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 KRT8P22-201ENST00000562317 1415 ntBASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM43Q96BQ3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 FO681548.1-201ENST00000455617 1132 ntBASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AC007551.1-201ENST00000457394 519 ntBASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms