Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 AC092474.2-201ENST00000424288 719 ntBASIC14.93□□□□□ -0.02
CPNE4Q96A23 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 AC092902.6-201ENST00000641783 218 ntBASIC14.93□□□□□ -0.02
CPNE4Q96A23 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.93□□□□□ -0.02
CPNE4Q96A23 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CPNE4Q96A23 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE4Q96A23 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 CICP6-201ENST00000457191 2729 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 AC211486.1-202ENST00000416371 468 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 CEND1P1-201ENST00000451006 455 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 RN7SL589P-201ENST00000481268 310 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 AC211476.1-201ENST00000503899 468 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 RARRES2P8-201ENST00000566335 367 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 MIR4469-201ENST00000583919 79 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 AD000864.1-201ENST00000624076 2295 ntBASIC14.92□□□□□ -0.02
CPNE4Q96A23 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE4Q96A23 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE4Q96A23 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms