Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
DDX1Q92499 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX1Q92499 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
DDX1Q92499 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
DDX1Q92499 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX1Q92499 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DDX1Q92499 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX1Q92499 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.66■□□□□ 0.42
DDX1Q92499 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.66■□□□□ 0.42
DDX1Q92499 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.66■□□□□ 0.42
DDX1Q92499 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 AL031055.1-201ENST00000606362 631 ntBASIC17.66■□□□□ 0.42
DDX1Q92499 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX1Q92499 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
DDX1Q92499 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX1Q92499 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX1Q92499 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.66■□□□□ 0.42
DDX1Q92499 AL513523.2-202ENST00000427283 2040 ntBASIC17.65■□□□□ 0.42
DDX1Q92499 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DDX1Q92499 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
DDX1Q92499 AC092474.2-201ENST00000424288 719 ntBASIC17.65■□□□□ 0.42
DDX1Q92499 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.65■□□□□ 0.42
DDX1Q92499 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX1Q92499 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX1Q92499 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX1Q92499 MIR4469-201ENST00000583919 79 ntBASIC17.65■□□□□ 0.42
DDX1Q92499 AC064836.3-201ENST00000607928 673 ntBASIC17.65■□□□□ 0.42
DDX1Q92499 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX1Q92499 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
DDX1Q92499 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.65■□□□□ 0.42
DDX1Q92499 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDX1Q92499 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDX1Q92499 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX1Q92499 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.64■□□□□ 0.42
DDX1Q92499 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.64■□□□□ 0.42
DDX1Q92499 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DDX1Q92499 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DDX1Q92499 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 PMS2P4-201ENST00000412466 1052 ntBASIC17.64■□□□□ 0.41
DDX1Q92499 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX1Q92499 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms