Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM3Q8TF72 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SHROOM3Q8TF72 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM3Q8TF72 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM3Q8TF72 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AC018695.7-201ENST00000624587 2492 ntBASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 TNRC18P3-201ENST00000441896 2691 ntBASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 TSEN15P1-201ENST00000423257 515 ntBASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 PRYP6-201ENST00000514804 343 ntBASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AC005829.1-201ENST00000570002 483 ntBASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM3Q8TF72 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 AC016027.1-202ENST00000607927 1699 ntBASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 DOC2GP-204ENST00000639052 2548 ntBASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM3Q8TF72 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 KRT18P34-201ENST00000488218 1270 ntBASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 AC112191.1-201ENST00000523689 701 ntBASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 REXO1L8P-201ENST00000604378 1897 ntBASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.86■□□□□ 0.29
SHROOM3Q8TF72 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms