Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 HINT2P1-201ENST00000419438 481 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 VDAC1P7-201ENST00000462417 847 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 AC106760.1-201ENST00000508690 800 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 AL355864.2-201ENST00000447420 863 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 ENPP7P5-201ENST00000541031 1031 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 AC005252.2-201ENST00000624630 1141 ntBASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC10.96□□□□□ -0.65
ALMS1Q8TCU4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 AZGP1P1-201ENST00000411909 902 ntBASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 AC016629.1-201ENST00000596579 586 ntBASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 KRT8P37-201ENST00000451609 1420 ntBASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ALMS1Q8TCU4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 PFN1P12-201ENST00000455938 534 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 MIR4706-201ENST00000582134 82 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC133539.2-201ENST00000604757 467 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC015967.2-201ENST00000624092 234 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC006435.4-201ENST00000625037 234 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AL356737.1-201ENST00000634391 234 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms