Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 RNU1-129P-201ENST00000384064 167 ntBASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 AL355306.1-201ENST00000415580 579 ntBASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 AC254562.1-201ENST00000417586 456 ntBASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 U1.21-201ENST00000580816 167 ntBASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 AL031055.1-201ENST00000606362 631 ntBASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FNDC9Q8TBE3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 CNN2P11-201ENST00000429351 262 ntBASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
FNDC9Q8TBE3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.96□□□□□ -0.02
FNDC9Q8TBE3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FNDC9Q8TBE3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms