Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 PRAL-201ENST00000624952 3286 ntBASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 AL353801.3-201ENST00000609898 542 ntBASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD2Q8NHY2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 NUS1P1-201ENST00000446295 882 ntBASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 RN7SL606P-201ENST00000472779 293 ntBASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 AD001527.2-201ENST00000622994 785 ntBASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 AL139011.1-202ENST00000642063 584 ntBASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 PPT1-215ENST00000641471 2368 ntBASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RFWD2Q8NHY2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 KRT8P49-201ENST00000604166 1432 ntBASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD2Q8NHY2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 460.6 ms