Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 U82695.1-201ENST00000635752 1889 ntBASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 PDIA3P1-201ENST00000471856 1510 ntBASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AC124283.3-201ENST00000570869 594 ntBASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 AC104989.1-201ENST00000519711 778 ntBASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
COL27A1Q8IZC6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 MEP1AP4-201ENST00000423244 1087 ntBASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 AL442647.2-201ENST00000429864 857 ntBASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 TARDBPP1-201ENST00000442013 1203 ntBASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
COL27A1Q8IZC6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 AL162726.2-201ENST00000438986 1017 ntBASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 AC006538.1-201ENST00000567905 1585 ntBASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 AC078925.2-201ENST00000624013 1973 ntBASIC15.33■□□□□ 0.04
COL27A1Q8IZC6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 AC005915.1-201ENST00000624912 2018 ntBASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL27A1Q8IZC6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms