Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AL162727.3-201ENST00000635661 2787 ntBASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 AC129492.6-201ENST00000611383 1305 ntBASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 AC079781.3-201ENST00000449110 356 ntBASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 OR7E47P-204ENST00000575924 449 ntBASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 AC022188.1-201ENST00000620960 1664 ntBASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC83Q8IWF9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AL365203.3-201ENST00000609742 2057 ntBASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AC005412.3-201ENST00000580309 715 ntBASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 AL691432.3-201ENST00000621860 400 ntBASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC83Q8IWF9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 REXO1L8P-201ENST00000604378 1897 ntBASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AC024909.3-201ENST00000611513 2257 ntBASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AC006449.6-201ENST00000612330 2296 ntBASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 KRT18P67-201ENST00000432816 1264 ntBASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AC108073.2-201ENST00000464002 357 ntBASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms