Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 KRT17P6-201ENST00000453795 1220 ntBASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 MPDU1-223ENST00000582151 728 ntBASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 AL590326.2-201ENST00000625139 305 ntBASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM1Q86UE6 CDC14C-201ENST00000428251 1719 ntBASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 IGHV3-47-201ENST00000425060 335 ntBASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 DRAXINP1-201ENST00000437611 948 ntBASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 POU5F1P6-201ENST00000466990 990 ntBASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 LINC01238-205ENST00000567549 1107 ntBASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 AC010331.1-201ENST00000611423 582 ntBASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM1Q86UE6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 AC022532.1-201ENST00000624563 1728 ntBASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM1Q86UE6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 LINC02447-202ENST00000501888 2146 ntBASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 DBET-201ENST00000630918 3363 ntBASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 KRT18P1-202ENST00000452408 1331 ntBASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms