Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 HLA-V-201ENST00000429037 534 ntBASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 CETN4P-206ENST00000642099 2168 ntBASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 RNA5SP410-201ENST00000516285 106 ntBASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 AL139011.1-202ENST00000642063 584 ntBASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC149Q6ZUS6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 AL133373.2-201ENST00000623187 2828 ntBASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 AC009477.1-201ENST00000452936 217 ntBASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 TP53TG3HP-202ENST00000569755 579 ntBASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms