Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 AC006538.1-201ENST00000567905 1585 ntBASIC19.7■□□□□ 0.74
CTR9Q6PD62 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 AL031731.1-201ENST00000642131 2094 ntBASIC19.69■□□□□ 0.74
CTR9Q6PD62 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTR9Q6PD62 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTR9Q6PD62 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 FOXO1B-201ENST00000504678 1527 ntBASIC19.68■□□□□ 0.74
CTR9Q6PD62 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 RBPMS2P1-201ENST00000437762 623 ntBASIC19.68■□□□□ 0.74
CTR9Q6PD62 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 AC073389.1-201ENST00000595595 795 ntBASIC19.68■□□□□ 0.74
CTR9Q6PD62 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTR9Q6PD62 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTR9Q6PD62 GGT4P-201ENST00000623672 1708 ntBASIC19.68■□□□□ 0.74
CTR9Q6PD62 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 AC106886.4-201ENST00000623557 2502 ntBASIC19.67■□□□□ 0.74
CTR9Q6PD62 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTR9Q6PD62 AC142381.1-201ENST00000426099 345 ntBASIC19.67■□□□□ 0.74
CTR9Q6PD62 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.67■□□□□ 0.74
CTR9Q6PD62 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms