Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 HLA-C-210ENST00000640219 976 ntBASIC15.9■□□□□ 0.14
RIF1Q5UIP0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 AC012441.1-201ENST00000446669 685 ntBASIC15.9■□□□□ 0.14
RIF1Q5UIP0 AC008267.1-201ENST00000474858 1069 ntBASIC15.9■□□□□ 0.14
RIF1Q5UIP0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 FZD10-202ENST00000539839 3282 ntBASIC15.9■□□□□ 0.14
RIF1Q5UIP0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RIF1Q5UIP0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AC093433.1-201ENST00000458048 571 ntBASIC15.89■□□□□ 0.13
RIF1Q5UIP0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RIF1Q5UIP0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 LINC00304-203ENST00000565008 1864 ntBASIC15.88■□□□□ 0.13
RIF1Q5UIP0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 FTLP10-202ENST00000505798 471 ntBASIC15.88■□□□□ 0.13
RIF1Q5UIP0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AP006547.1-201ENST00000563435 692 ntBASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIF1Q5UIP0 AC074044.1-201ENST00000609673 707 ntBASIC15.88■□□□□ 0.13
RIF1Q5UIP0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms