Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC098859.1-201ENST00000502915 1238 ntBASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 BANF1P1-201ENST00000553684 263 ntBASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 RN7SL602P-201ENST00000578326 324 ntBASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 AL139011.1-202ENST00000642063 584 ntBASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 PCDHB18P-201ENST00000524813 2368 ntBASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNFT1Q5M7Z0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AC005332.8-201ENST00000622750 2735 ntBASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 FAM207CP-201ENST00000443486 507 ntBASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AC190387.1-201ENST00000551683 408 ntBASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AF228730.6-201ENST00000641497 218 ntBASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AC084121.3-201ENST00000641716 218 ntBASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 AC105233.6-201ENST00000642093 218 ntBASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNFT1Q5M7Z0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 SERBP1P5-201ENST00000510079 1181 ntBASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 RNA5SP410-201ENST00000516285 106 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms