Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 VN2R19P-201ENST00000442399 1052 ntBASIC16.8■□□□□ 0.28
CDH17Q12864 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.8■□□□□ 0.28
CDH17Q12864 POU5F1P6-201ENST00000466990 990 ntBASIC16.8■□□□□ 0.28
CDH17Q12864 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH17Q12864 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH17Q12864 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 AC020765.3-201ENST00000613051 740 ntBASIC16.8■□□□□ 0.28
CDH17Q12864 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH17Q12864 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH17Q12864 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDH17Q12864 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CDH17Q12864 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH17Q12864 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH17Q12864 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH17Q12864 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH17Q12864 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 CRYGEP-201ENST00000412192 528 ntBASIC16.79■□□□□ 0.28
CDH17Q12864 RNA5SP415-201ENST00000517246 115 ntBASIC16.79■□□□□ 0.28
CDH17Q12864 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH17Q12864 IGHV3-22-201ENST00000520721 359 ntBASIC16.79■□□□□ 0.28
CDH17Q12864 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH17Q12864 AL645728.2-201ENST00000641974 660 ntBASIC16.79■□□□□ 0.28
CDH17Q12864 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH17Q12864 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH17Q12864 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH17Q12864 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.78■□□□□ 0.28
CDH17Q12864 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH17Q12864 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 AL513480.1-201ENST00000451731 511 ntBASIC16.78■□□□□ 0.28
CDH17Q12864 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 AL031432.2-201ENST00000566714 459 ntBASIC16.78■□□□□ 0.28
CDH17Q12864 AL928711.1-201ENST00000570165 459 ntBASIC16.78■□□□□ 0.28
CDH17Q12864 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDH17Q12864 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDH17Q12864 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH17Q12864 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDH17Q12864 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH17Q12864 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH17Q12864 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH17Q12864 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH17Q12864 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH17Q12864 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH17Q12864 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms