Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPAQ06546 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.36■□□□□ 0.69
GABPAQ06546 PKD1P1-201ENST00000458669 6805 ntBASIC19.36■□□□□ 0.69
GABPAQ06546 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPAQ06546 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GABPAQ06546 AC236430.1-201ENST00000402231 743 ntBASIC19.36■□□□□ 0.69
GABPAQ06546 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.36■□□□□ 0.69
GABPAQ06546 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.36■□□□□ 0.69
GABPAQ06546 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 RNA5SP410-201ENST00000516285 106 ntBASIC19.36■□□□□ 0.69
GABPAQ06546 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPAQ06546 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 AC105021.1-202ENST00000570572 669 ntBASIC19.36■□□□□ 0.69
GABPAQ06546 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.36■□□□□ 0.69
GABPAQ06546 RN7SL828P-201ENST00000607615 303 ntBASIC19.36■□□□□ 0.69
GABPAQ06546 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GABPAQ06546 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPAQ06546 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GABPAQ06546 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GABPAQ06546 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPAQ06546 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GABPAQ06546 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.35■□□□□ 0.69
GABPAQ06546 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.35■□□□□ 0.69
GABPAQ06546 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.35■□□□□ 0.69
GABPAQ06546 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.35■□□□□ 0.69
GABPAQ06546 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.35■□□□□ 0.69
GABPAQ06546 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.35■□□□□ 0.69
GABPAQ06546 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.35■□□□□ 0.69
GABPAQ06546 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.35■□□□□ 0.69
GABPAQ06546 GGT3P-204ENST00000453783 1664 ntBASIC19.35■□□□□ 0.69
GABPAQ06546 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 AC106820.2-201ENST00000563775 3264 ntBASIC19.35■□□□□ 0.69
GABPAQ06546 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.35■□□□□ 0.69
GABPAQ06546 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
GABPAQ06546 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GABPAQ06546 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABPAQ06546 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.34■□□□□ 0.69
GABPAQ06546 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.34■□□□□ 0.69
GABPAQ06546 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
GABPAQ06546 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 FAM207CP-201ENST00000443486 507 ntBASIC19.34■□□□□ 0.69
GABPAQ06546 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.34■□□□□ 0.69
GABPAQ06546 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GABPAQ06546 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.34■□□□□ 0.69
GABPAQ06546 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.34■□□□□ 0.69
GABPAQ06546 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.34■□□□□ 0.69
GABPAQ06546 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.34■□□□□ 0.69
GABPAQ06546 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.34■□□□□ 0.69
GABPAQ06546 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 HLA-A-202ENST00000376806 1854 ntBASIC19.34■□□□□ 0.69
GABPAQ06546 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABPAQ06546 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms