Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
YBX1P67809 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.19■□□□□ 0.18
YBX1P67809 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
YBX1P67809 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.19■□□□□ 0.18
YBX1P67809 AC105917.1-201ENST00000506637 2539 ntBASIC16.19■□□□□ 0.18
YBX1P67809 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.19■□□□□ 0.18
YBX1P67809 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
YBX1P67809 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
YBX1P67809 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
YBX1P67809 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.19■□□□□ 0.18
YBX1P67809 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.19■□□□□ 0.18
YBX1P67809 AC005412.3-201ENST00000580309 715 ntBASIC16.19■□□□□ 0.18
YBX1P67809 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 MIR4515-201ENST00000584082 81 ntBASIC16.19■□□□□ 0.18
YBX1P67809 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
YBX1P67809 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.19■□□□□ 0.18
YBX1P67809 AC023141.13-201ENST00000604991 943 ntBASIC16.19■□□□□ 0.18
YBX1P67809 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.19■□□□□ 0.18
YBX1P67809 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
YBX1P67809 LINC00895-201ENST00000629028 1637 ntBASIC16.19■□□□□ 0.18
YBX1P67809 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.19■□□□□ 0.18
YBX1P67809 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
YBX1P67809 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.18■□□□□ 0.18
YBX1P67809 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
YBX1P67809 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.18■□□□□ 0.18
YBX1P67809 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.18■□□□□ 0.18
YBX1P67809 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 CYP2A7P1-201ENST00000595391 815 ntBASIC16.18■□□□□ 0.18
YBX1P67809 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.18■□□□□ 0.18
YBX1P67809 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YBX1P67809 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.18■□□□□ 0.18
YBX1P67809 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
YBX1P67809 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms