Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.11■□□□□ 0.97
BRPF1P55201 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.11■□□□□ 0.97
BRPF1P55201 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.11■□□□□ 0.97
BRPF1P55201 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
BRPF1P55201 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
BRPF1P55201 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.11■□□□□ 0.97
BRPF1P55201 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.11■□□□□ 0.97
BRPF1P55201 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRPF1P55201 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.11■□□□□ 0.97
BRPF1P55201 AC016027.1-202ENST00000607927 1699 ntBASIC21.11■□□□□ 0.97
BRPF1P55201 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.11■□□□□ 0.97
BRPF1P55201 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
BRPF1P55201 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRPF1P55201 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRPF1P55201 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 AKAP8P1-201ENST00000434743 1349 ntBASIC21.1■□□□□ 0.97
BRPF1P55201 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
BRPF1P55201 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.1■□□□□ 0.97
BRPF1P55201 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.1■□□□□ 0.97
BRPF1P55201 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.1■□□□□ 0.97
BRPF1P55201 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.1■□□□□ 0.97
BRPF1P55201 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.1■□□□□ 0.97
BRPF1P55201 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.1■□□□□ 0.97
BRPF1P55201 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.1■□□□□ 0.97
BRPF1P55201 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.1■□□□□ 0.97
BRPF1P55201 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 AC138761.1-201ENST00000584393 385 ntBASIC21.1■□□□□ 0.97
BRPF1P55201 AC073389.1-201ENST00000595595 795 ntBASIC21.1■□□□□ 0.97
BRPF1P55201 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRPF1P55201 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.1■□□□□ 0.97
BRPF1P55201 ELL2P1-201ENST00000413990 1906 ntBASIC21.1■□□□□ 0.97
BRPF1P55201 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.09■□□□□ 0.97
BRPF1P55201 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.09■□□□□ 0.97
BRPF1P55201 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.09■□□□□ 0.97
BRPF1P55201 KRT18P34-201ENST00000488218 1270 ntBASIC21.09■□□□□ 0.97
BRPF1P55201 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
BRPF1P55201 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.09■□□□□ 0.97
BRPF1P55201 AC027612.4-201ENST00000605371 583 ntBASIC21.09■□□□□ 0.97
BRPF1P55201 AC093028.1-201ENST00000622998 982 ntBASIC21.09■□□□□ 0.97
BRPF1P55201 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
BRPF1P55201 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.09■□□□□ 0.97
BRPF1P55201 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.09■□□□□ 0.97
BRPF1P55201 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRPF1P55201 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
BRPF1P55201 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.08■□□□□ 0.97
BRPF1P55201 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
BRPF1P55201 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.08■□□□□ 0.97
BRPF1P55201 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.08■□□□□ 0.97
BRPF1P55201 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
BRPF1P55201 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 AL355306.1-201ENST00000415580 579 ntBASIC21.08■□□□□ 0.97
BRPF1P55201 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
BRPF1P55201 ACTG1P14-201ENST00000446382 1122 ntBASIC21.08■□□□□ 0.97
BRPF1P55201 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.08■□□□□ 0.97
BRPF1P55201 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.08■□□□□ 0.97
BRPF1P55201 RARRES2P8-201ENST00000566335 367 ntBASIC21.08■□□□□ 0.97
BRPF1P55201 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRPF1P55201 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.08■□□□□ 0.97
BRPF1P55201 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
BRPF1P55201 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
BRPF1P55201 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
BRPF1P55201 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms