Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.84■□□□□ 0.13
NR1H2P55055 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.84■□□□□ 0.13
NR1H2P55055 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H2P55055 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
NR1H2P55055 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H2P55055 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H2P55055 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H2P55055 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H2P55055 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
NR1H2P55055 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H2P55055 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.83■□□□□ 0.12
NR1H2P55055 KRT17P6-201ENST00000453795 1220 ntBASIC15.83■□□□□ 0.12
NR1H2P55055 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H2P55055 KRT18P31-201ENST00000506277 1292 ntBASIC15.83■□□□□ 0.12
NR1H2P55055 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
NR1H2P55055 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.83■□□□□ 0.12
NR1H2P55055 AC011840.4-201ENST00000578471 627 ntBASIC15.83■□□□□ 0.12
NR1H2P55055 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.83■□□□□ 0.12
NR1H2P55055 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.83■□□□□ 0.12
NR1H2P55055 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H2P55055 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H2P55055 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NR1H2P55055 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NR1H2P55055 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NR1H2P55055 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.82■□□□□ 0.12
NR1H2P55055 AL139327.4-201ENST00000612362 153 ntBASIC15.82■□□□□ 0.12
NR1H2P55055 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.82■□□□□ 0.12
NR1H2P55055 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H2P55055 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H2P55055 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
NR1H2P55055 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms