Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LIMK1P53667 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LIMK1P53667 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
LIMK1P53667 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LIMK1P53667 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.36■□□□□ 0.21
LIMK1P53667 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
LIMK1P53667 AP005482.1-201ENST00000563722 1273 ntBASIC16.36■□□□□ 0.21
LIMK1P53667 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 AC004840.1-201ENST00000636359 365 ntBASIC16.36■□□□□ 0.21
LIMK1P53667 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.36■□□□□ 0.21
LIMK1P53667 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LIMK1P53667 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LIMK1P53667 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.36■□□□□ 0.21
LIMK1P53667 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK1P53667 CETN4P-206ENST00000642099 2168 ntBASIC16.36■□□□□ 0.21
LIMK1P53667 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.35■□□□□ 0.21
LIMK1P53667 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LIMK1P53667 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LIMK1P53667 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LIMK1P53667 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LIMK1P53667 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.35■□□□□ 0.21
LIMK1P53667 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.35■□□□□ 0.21
LIMK1P53667 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 AC093004.1-201ENST00000508850 424 ntBASIC16.35■□□□□ 0.21
LIMK1P53667 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LIMK1P53667 AC073389.1-201ENST00000595595 795 ntBASIC16.35■□□□□ 0.21
LIMK1P53667 AC099568.2-201ENST00000609194 695 ntBASIC16.35■□□□□ 0.21
LIMK1P53667 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.35■□□□□ 0.21
LIMK1P53667 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.35■□□□□ 0.21
LIMK1P53667 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.35■□□□□ 0.21
LIMK1P53667 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.35■□□□□ 0.21
LIMK1P53667 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LIMK1P53667 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.34■□□□□ 0.21
LIMK1P53667 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LIMK1P53667 AC016027.1-202ENST00000607927 1699 ntBASIC16.34■□□□□ 0.21
LIMK1P53667 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.34■□□□□ 0.21
LIMK1P53667 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LIMK1P53667 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LIMK1P53667 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.34■□□□□ 0.21
LIMK1P53667 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LIMK1P53667 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.34■□□□□ 0.21
LIMK1P53667 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LIMK1P53667 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.34■□□□□ 0.21
LIMK1P53667 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.34■□□□□ 0.21
LIMK1P53667 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK1P53667 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.34■□□□□ 0.21
LIMK1P53667 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms