Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF140P52738 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ZNF140P52738 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 PKD1P1-201ENST00000458669 6805 ntBASIC16.49■□□□□ 0.23
ZNF140P52738 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ZNF140P52738 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 WASH6P-202ENST00000359512 1437 ntBASIC16.49■□□□□ 0.23
ZNF140P52738 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 AC004832.2-201ENST00000426397 482 ntBASIC16.49■□□□□ 0.23
ZNF140P52738 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.49■□□□□ 0.23
ZNF140P52738 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.49■□□□□ 0.23
ZNF140P52738 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 AL161645.1-201ENST00000622716 1255 ntBASIC16.49■□□□□ 0.23
ZNF140P52738 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF140P52738 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF140P52738 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF140P52738 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF140P52738 PMS2P7-201ENST00000506558 1336 ntBASIC16.48■□□□□ 0.23
ZNF140P52738 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 DOC2GP-204ENST00000639052 2548 ntBASIC16.48■□□□□ 0.23
ZNF140P52738 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF140P52738 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.48■□□□□ 0.23
ZNF140P52738 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.48■□□□□ 0.23
ZNF140P52738 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF140P52738 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF140P52738 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ZNF140P52738 AC092902.6-201ENST00000641783 218 ntBASIC16.48■□□□□ 0.23
ZNF140P52738 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF140P52738 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.48■□□□□ 0.23
ZNF140P52738 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ZNF140P52738 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF140P52738 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 REXO1L8P-201ENST00000604378 1897 ntBASIC16.48■□□□□ 0.23
ZNF140P52738 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF140P52738 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF140P52738 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF140P52738 AC005622.1-201ENST00000636801 1703 ntBASIC16.48■□□□□ 0.23
ZNF140P52738 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF140P52738 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ZNF140P52738 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms