Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN4P51793 AL353779.1-201ENST00000434793 351 ntBASIC17.38■□□□□ 0.37
CLCN4P51793 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN4P51793 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN4P51793 AL359881.2-201ENST00000602973 570 ntBASIC17.38■□□□□ 0.37
CLCN4P51793 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN4P51793 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLCN4P51793 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN4P51793 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.38■□□□□ 0.37
CLCN4P51793 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN4P51793 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN4P51793 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN4P51793 KRT8P39-201ENST00000396270 1433 ntBASIC17.38■□□□□ 0.37
CLCN4P51793 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLCN4P51793 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN4P51793 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN4P51793 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN4P51793 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN4P51793 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 ZNF890P-202ENST00000530367 1156 ntBASIC17.37■□□□□ 0.37
CLCN4P51793 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN4P51793 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CLCN4P51793 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLCN4P51793 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN4P51793 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN4P51793 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLCN4P51793 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN4P51793 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN4P51793 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN4P51793 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCN4P51793 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
CLCN4P51793 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCN4P51793 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 AC135586.1-201ENST00000539323 574 ntBASIC17.36■□□□□ 0.37
CLCN4P51793 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CLCN4P51793 AC140912.1-201ENST00000577171 1054 ntBASIC17.36■□□□□ 0.37
CLCN4P51793 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCN4P51793 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCN4P51793 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 BTBD7P1-201ENST00000447253 1453 ntBASIC17.36■□□□□ 0.37
CLCN4P51793 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN4P51793 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN4P51793 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN4P51793 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN4P51793 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLCN4P51793 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN4P51793 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLCN4P51793 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN4P51793 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CLCN4P51793 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN4P51793 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN4P51793 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN4P51793 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN4P51793 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN4P51793 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLCN4P51793 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN4P51793 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN4P51793 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLCN4P51793 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms