Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 AP005117.1-201ENST00000584346 1413 ntBASIC15.15■□□□□ 0.02
CENPAP49450 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CENPAP49450 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 LINC00895-201ENST00000629028 1637 ntBASIC15.14■□□□□ 0.01
CENPAP49450 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.14■□□□□ 0.01
CENPAP49450 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
CENPAP49450 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 AL122018.1-201ENST00000446607 2310 ntBASIC15.14■□□□□ 0.01
CENPAP49450 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CENPAP49450 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 HCG4P8-203ENST00000443049 980 ntBASIC15.14■□□□□ 0.01
CENPAP49450 PRYP5-201ENST00000451909 266 ntBASIC15.14■□□□□ 0.01
CENPAP49450 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.14■□□□□ 0.01
CENPAP49450 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CENPAP49450 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.14■□□□□ 0.01
CENPAP49450 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.14■□□□□ 0.01
CENPAP49450 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CENPAP49450 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CENPAP49450 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CENPAP49450 PCDH8P1-201ENST00000428983 2773 ntBASIC15.13■□□□□ 0.01
CENPAP49450 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.13■□□□□ 0.01
CENPAP49450 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CENPAP49450 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CENPAP49450 AL139011.1-202ENST00000642063 584 ntBASIC15.13■□□□□ 0.01
CENPAP49450 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms