Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
SLC6A12P48065 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC6A12P48065 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC6A12P48065 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC6A12P48065 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC6A12P48065 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 AL591424.1-201ENST00000442569 1213 ntBASIC16■□□□□ 0.15
SLC6A12P48065 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16■□□□□ 0.15
SLC6A12P48065 PDPK2P-202ENST00000562415 1191 ntBASIC16■□□□□ 0.15
SLC6A12P48065 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
SLC6A12P48065 AC140113.2-201ENST00000604370 208 ntBASIC16■□□□□ 0.15
SLC6A12P48065 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16■□□□□ 0.15
SLC6A12P48065 AC027601.4-201ENST00000611259 610 ntBASIC16■□□□□ 0.15
SLC6A12P48065 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16■□□□□ 0.15
SLC6A12P48065 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC6A12P48065 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16■□□□□ 0.15
SLC6A12P48065 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC6A12P48065 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC6A12P48065 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A12P48065 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC6A12P48065 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A12P48065 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 AC092919.2-201ENST00000623631 1645 ntBASIC15.99■□□□□ 0.15
SLC6A12P48065 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.99■□□□□ 0.15
SLC6A12P48065 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A12P48065 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC6A12P48065 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A12P48065 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC6A12P48065 AL078644.1-201ENST00000609881 752 ntBASIC15.99■□□□□ 0.15
SLC6A12P48065 FAM197Y3-203ENST00000618346 717 ntBASIC15.99■□□□□ 0.15
SLC6A12P48065 AL513190.1-201ENST00000621254 727 ntBASIC15.99■□□□□ 0.15
SLC6A12P48065 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC6A12P48065 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A12P48065 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
SLC6A12P48065 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC6A12P48065 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 AC005622.1-201ENST00000636801 1703 ntBASIC15.99■□□□□ 0.15
SLC6A12P48065 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms