Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.6■□□□□ 0.41
BRCC3P46736 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.6■□□□□ 0.41
BRCC3P46736 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.6■□□□□ 0.41
BRCC3P46736 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.6■□□□□ 0.41
BRCC3P46736 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
BRCC3P46736 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.6■□□□□ 0.41
BRCC3P46736 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BRCC3P46736 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
BRCC3P46736 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.6■□□□□ 0.41
BRCC3P46736 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.59■□□□□ 0.41
BRCC3P46736 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 FAM220BP-201ENST00000377689 816 ntBASIC17.59■□□□□ 0.41
BRCC3P46736 MIR661-201ENST00000384842 89 ntBASIC17.59■□□□□ 0.41
BRCC3P46736 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 AC098859.1-201ENST00000502915 1238 ntBASIC17.59■□□□□ 0.41
BRCC3P46736 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.59■□□□□ 0.41
BRCC3P46736 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.59■□□□□ 0.41
BRCC3P46736 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.59■□□□□ 0.41
BRCC3P46736 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.59■□□□□ 0.41
BRCC3P46736 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.59■□□□□ 0.41
BRCC3P46736 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRCC3P46736 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
BRCC3P46736 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
BRCC3P46736 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.58■□□□□ 0.41
BRCC3P46736 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRCC3P46736 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.58■□□□□ 0.41
BRCC3P46736 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRCC3P46736 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
BRCC3P46736 AC006538.1-201ENST00000567905 1585 ntBASIC17.58■□□□□ 0.41
BRCC3P46736 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
BRCC3P46736 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRCC3P46736 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRCC3P46736 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
BRCC3P46736 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.58■□□□□ 0.4
BRCC3P46736 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.58■□□□□ 0.4
BRCC3P46736 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.58■□□□□ 0.4
BRCC3P46736 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.58■□□□□ 0.4
BRCC3P46736 RNA5SP410-201ENST00000516285 106 ntBASIC17.58■□□□□ 0.4
BRCC3P46736 AC027369.6-201ENST00000525520 931 ntBASIC17.58■□□□□ 0.4
BRCC3P46736 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.58■□□□□ 0.4
BRCC3P46736 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.58■□□□□ 0.4
BRCC3P46736 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.58■□□□□ 0.4
BRCC3P46736 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.58■□□□□ 0.4
BRCC3P46736 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 AC007967.4-201ENST00000614700 386 ntBASIC17.58■□□□□ 0.4
BRCC3P46736 SPDYE12P-201ENST00000618416 771 ntBASIC17.58■□□□□ 0.4
BRCC3P46736 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BRCC3P46736 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BRCC3P46736 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.58■□□□□ 0.4
BRCC3P46736 AC078925.2-201ENST00000624013 1973 ntBASIC17.58■□□□□ 0.4
BRCC3P46736 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BRCC3P46736 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BRCC3P46736 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRCC3P46736 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.58■□□□□ 0.4
BRCC3P46736 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms