Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.75■□□□□ 0.43
SSR1P43307 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.75■□□□□ 0.43
SSR1P43307 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 SAPCD2P3-201ENST00000455031 850 ntBASIC17.75■□□□□ 0.43
SSR1P43307 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.75■□□□□ 0.43
SSR1P43307 DUX4L17-201ENST00000557360 1267 ntBASIC17.75■□□□□ 0.43
SSR1P43307 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.75■□□□□ 0.43
SSR1P43307 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSR1P43307 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSR1P43307 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSR1P43307 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.75■□□□□ 0.43
SSR1P43307 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
SSR1P43307 PI4KAP1-204ENST00000612579 1703 ntBASIC17.75■□□□□ 0.43
SSR1P43307 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR1P43307 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR1P43307 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SSR1P43307 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 AKR1C7P-201ENST00000305623 895 ntBASIC17.74■□□□□ 0.43
SSR1P43307 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.74■□□□□ 0.43
SSR1P43307 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 KRT18P56-201ENST00000507275 550 ntBASIC17.74■□□□□ 0.43
SSR1P43307 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 IFNL4P1-201ENST00000607083 540 ntBASIC17.74■□□□□ 0.43
SSR1P43307 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR1P43307 AC092364.2-201ENST00000596710 2692 ntBASIC17.74■□□□□ 0.43
SSR1P43307 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR1P43307 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SSR1P43307 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 PCDHA1-201ENST00000378133 2726 ntBASIC17.73■□□□□ 0.43
SSR1P43307 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SSR1P43307 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR1P43307 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR1P43307 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SSR1P43307 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR1P43307 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.73■□□□□ 0.43
SSR1P43307 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.73■□□□□ 0.43
SSR1P43307 AF238378.1-201ENST00000526806 358 ntBASIC17.73■□□□□ 0.43
SSR1P43307 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR1P43307 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.73■□□□□ 0.43
SSR1P43307 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR1P43307 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms