Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.29■□□□□ 0.52
RFC5P40937 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.29■□□□□ 0.52
RFC5P40937 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 ALG1L8P-201ENST00000533887 760 ntBASIC18.29■□□□□ 0.52
RFC5P40937 AC026150.2-201ENST00000564693 1156 ntBASIC18.29■□□□□ 0.52
RFC5P40937 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.29■□□□□ 0.52
RFC5P40937 AC015911.4-201ENST00000588022 1070 ntBASIC18.29■□□□□ 0.52
RFC5P40937 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
RFC5P40937 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC5P40937 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC5P40937 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC5P40937 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 SPDYE14P-201ENST00000442619 822 ntBASIC18.28■□□□□ 0.52
RFC5P40937 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.28■□□□□ 0.52
RFC5P40937 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 HLA-A-202ENST00000376806 1854 ntBASIC18.28■□□□□ 0.52
RFC5P40937 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC5P40937 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RFC5P40937 RNF216P1-203ENST00000404404 2427 ntBASIC18.28■□□□□ 0.52
RFC5P40937 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFC5P40937 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.27■□□□□ 0.52
RFC5P40937 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFC5P40937 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC5P40937 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC5P40937 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC5P40937 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 CNN2P2-201ENST00000443536 909 ntBASIC18.27■□□□□ 0.52
RFC5P40937 CNN2P3-201ENST00000450201 906 ntBASIC18.27■□□□□ 0.52
RFC5P40937 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC5P40937 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
RFC5P40937 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC5P40937 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 AL136317.3-201ENST00000618497 906 ntBASIC18.27■□□□□ 0.52
RFC5P40937 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC5P40937 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC5P40937 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC5P40937 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
RFC5P40937 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RFC5P40937 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFC5P40937 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC5P40937 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC5P40937 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFC5P40937 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC5P40937 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.27■□□□□ 0.51
RFC5P40937 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFC5P40937 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC5P40937 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RFC5P40937 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC5P40937 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC5P40937 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC5P40937 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFC5P40937 GGT3P-204ENST00000453783 1664 ntBASIC18.26■□□□□ 0.51
RFC5P40937 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms