Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDNFP39905 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GDNFP39905 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.54□□□□□ -0.08
GDNFP39905 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDNFP39905 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDNFP39905 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.54□□□□□ -0.08
GDNFP39905 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GDNFP39905 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDNFP39905 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDNFP39905 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GDNFP39905 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
GDNFP39905 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GDNFP39905 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.53□□□□□ -0.08
GDNFP39905 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GDNFP39905 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.53□□□□□ -0.08
GDNFP39905 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.53□□□□□ -0.08
GDNFP39905 AC097374.2-201ENST00000618617 1306 ntBASIC14.53□□□□□ -0.08
GDNFP39905 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.53□□□□□ -0.08
GDNFP39905 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GDNFP39905 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.53□□□□□ -0.08
GDNFP39905 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GDNFP39905 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDNFP39905 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GDNFP39905 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.52□□□□□ -0.08
GDNFP39905 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.52□□□□□ -0.08
GDNFP39905 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.52□□□□□ -0.08
GDNFP39905 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.52□□□□□ -0.08
GDNFP39905 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GDNFP39905 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GDNFP39905 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GDNFP39905 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
GDNFP39905 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 AC246785.2-201ENST00000432512 513 ntBASIC14.52□□□□□ -0.09
GDNFP39905 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.52□□□□□ -0.09
GDNFP39905 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.52□□□□□ -0.09
GDNFP39905 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.52□□□□□ -0.09
GDNFP39905 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.52□□□□□ -0.09
GDNFP39905 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.52□□□□□ -0.09
GDNFP39905 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.52□□□□□ -0.09
GDNFP39905 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.52□□□□□ -0.09
GDNFP39905 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.52□□□□□ -0.09
GDNFP39905 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.52□□□□□ -0.09
GDNFP39905 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
GDNFP39905 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.52□□□□□ -0.09
GDNFP39905 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.52□□□□□ -0.09
GDNFP39905 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.52□□□□□ -0.09
GDNFP39905 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.52□□□□□ -0.09
GDNFP39905 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GDNFP39905 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms