Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL031055.1-201ENST00000606362 631 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 AC021097.1-201ENST00000607902 574 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 AL161645.1-201ENST00000622716 1255 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 AL139011.1-202ENST00000642063 584 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 AC092865.6-201ENST00000642101 219 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFSF4P23510 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFSF4P23510 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TNFSF4P23510 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TNFSF4P23510 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 YBX2P1-201ENST00000394192 760 ntBASIC14.23□□□□□ -0.13
TNFSF4P23510 HMGA1P7-201ENST00000406908 502 ntBASIC14.23□□□□□ -0.13
TNFSF4P23510 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.23□□□□□ -0.13
TNFSF4P23510 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TNFSF4P23510 MIR3909-201ENST00000579518 119 ntBASIC14.23□□□□□ -0.13
TNFSF4P23510 C20orf181-201ENST00000623918 480 ntBASIC14.23□□□□□ -0.13
TNFSF4P23510 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.23□□□□□ -0.13
TNFSF4P23510 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFSF4P23510 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFSF4P23510 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TNFSF4P23510 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFSF4P23510 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TNFSF4P23510 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
TNFSF4P23510 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFSF4P23510 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TNFSF4P23510 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 MKNK2P1-201ENST00000437526 628 ntBASIC14.22□□□□□ -0.13
TNFSF4P23510 ACTG1P14-201ENST00000446382 1122 ntBASIC14.22□□□□□ -0.13
TNFSF4P23510 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.22□□□□□ -0.13
TNFSF4P23510 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.22□□□□□ -0.13
TNFSF4P23510 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.22□□□□□ -0.13
TNFSF4P23510 AC005829.1-201ENST00000570002 483 ntBASIC14.22□□□□□ -0.13
TNFSF4P23510 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.22□□□□□ -0.13
TNFSF4P23510 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms