Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A2P16615 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A2P16615 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATP2A2P16615 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A2P16615 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A2P16615 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A2P16615 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A2P16615 AC005412.3-201ENST00000580309 715 ntBASIC18.38■□□□□ 0.53
ATP2A2P16615 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2A2P16615 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A2P16615 AC046158.3-201ENST00000624947 2558 ntBASIC18.38■□□□□ 0.53
ATP2A2P16615 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2A2P16615 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A2P16615 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A2P16615 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A2P16615 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
ATP2A2P16615 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ATP2A2P16615 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A2P16615 AC012569.1-201ENST00000591191 1524 ntBASIC18.38■□□□□ 0.53
ATP2A2P16615 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A2P16615 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A2P16615 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ATP2A2P16615 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 MRPS18AP1-201ENST00000414458 589 ntBASIC18.37■□□□□ 0.53
ATP2A2P16615 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A2P16615 AC109635.5-201ENST00000533593 962 ntBASIC18.37■□□□□ 0.53
ATP2A2P16615 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A2P16615 MIR4453-201ENST00000584019 89 ntBASIC18.37■□□□□ 0.53
ATP2A2P16615 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ATP2A2P16615 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2A2P16615 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A2P16615 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A2P16615 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A2P16615 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A2P16615 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A2P16615 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A2P16615 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A2P16615 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ATP2A2P16615 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2A2P16615 WASH6P-202ENST00000359512 1437 ntBASIC18.36■□□□□ 0.53
ATP2A2P16615 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A2P16615 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2A2P16615 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2A2P16615 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A2P16615 AL023806.1-201ENST00000603994 1649 ntBASIC18.36■□□□□ 0.53
ATP2A2P16615 AC004233.3-201ENST00000607794 1269 ntBASIC18.36■□□□□ 0.53
ATP2A2P16615 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A2P16615 AC008267.7-201ENST00000624570 1194 ntBASIC18.36■□□□□ 0.53
ATP2A2P16615 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A2P16615 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
ATP2A2P16615 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
ATP2A2P16615 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A2P16615 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A2P16615 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A2P16615 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A2P16615 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A2P16615 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A2P16615 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATP2A2P16615 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A2P16615 KRT17P7-201ENST00000451704 1104 ntBASIC18.35■□□□□ 0.53
ATP2A2P16615 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A2P16615 AC027369.6-201ENST00000525520 931 ntBASIC18.35■□□□□ 0.53
ATP2A2P16615 AP000842.3-202ENST00000569238 1080 ntBASIC18.35■□□□□ 0.53
ATP2A2P16615 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.35■□□□□ 0.53
ATP2A2P16615 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP2A2P16615 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A2P16615 AD000864.1-201ENST00000624076 2295 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms