Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SP9P0CG40 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.12■□□□□ 0.17
SP9P0CG40 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SP9P0CG40 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.12■□□□□ 0.17
SP9P0CG40 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SP9P0CG40 FTH1P14-201ENST00000482930 551 ntBASIC16.12■□□□□ 0.17
SP9P0CG40 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SP9P0CG40 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.12■□□□□ 0.17
SP9P0CG40 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.12■□□□□ 0.17
SP9P0CG40 AP001258.2-201ENST00000529891 490 ntBASIC16.12■□□□□ 0.17
SP9P0CG40 ENPP7P5-201ENST00000541031 1031 ntBASIC16.12■□□□□ 0.17
SP9P0CG40 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.12■□□□□ 0.17
SP9P0CG40 AC079328.1-201ENST00000560358 952 ntBASIC16.12■□□□□ 0.17
SP9P0CG40 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.12■□□□□ 0.17
SP9P0CG40 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SP9P0CG40 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.12■□□□□ 0.17
SP9P0CG40 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.12■□□□□ 0.17
SP9P0CG40 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SP9P0CG40 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.12■□□□□ 0.17
SP9P0CG40 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.12■□□□□ 0.17
SP9P0CG40 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.12■□□□□ 0.17
SP9P0CG40 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SP9P0CG40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SP9P0CG40 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP9P0CG40 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 AC116353.5-201ENST00000638148 1699 ntBASIC16.11■□□□□ 0.17
SP9P0CG40 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SP9P0CG40 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 SNX33P1-201ENST00000592116 1762 ntBASIC16.11■□□□□ 0.17
SP9P0CG40 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.11■□□□□ 0.17
SP9P0CG40 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SP9P0CG40 AP000974.1-201ENST00000623909 2387 ntBASIC16.11■□□□□ 0.17
SP9P0CG40 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.11■□□□□ 0.17
SP9P0CG40 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.11■□□□□ 0.17
SP9P0CG40 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SP9P0CG40 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.11■□□□□ 0.17
SP9P0CG40 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.11■□□□□ 0.17
SP9P0CG40 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.11■□□□□ 0.17
SP9P0CG40 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 AL022328.3-201ENST00000607943 679 ntBASIC16.11■□□□□ 0.17
SP9P0CG40 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.11■□□□□ 0.17
SP9P0CG40 AL158212.4-201ENST00000624062 1286 ntBASIC16.11■□□□□ 0.17
SP9P0CG40 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.11■□□□□ 0.17
SP9P0CG40 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SP9P0CG40 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.11■□□□□ 0.17
SP9P0CG40 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SP9P0CG40 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.1■□□□□ 0.17
SP9P0CG40 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.1■□□□□ 0.17
SP9P0CG40 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.1■□□□□ 0.17
SP9P0CG40 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SP9P0CG40 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.1■□□□□ 0.17
SP9P0CG40 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SP9P0CG40 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SP9P0CG40 MIR663B-201ENST00000408361 115 ntBASIC16.1■□□□□ 0.17
SP9P0CG40 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.1■□□□□ 0.17
SP9P0CG40 AC026954.1-201ENST00000429771 1293 ntBASIC16.1■□□□□ 0.17
SP9P0CG40 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.1■□□□□ 0.17
SP9P0CG40 AC016694.1-201ENST00000434179 700 ntBASIC16.1■□□□□ 0.17
SP9P0CG40 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
SP9P0CG40 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SP9P0CG40 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms