Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
FREM3P0C091 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 GGT4P-201ENST00000623672 1708 ntBASIC15.06■□□□□ 0
FREM3P0C091 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
FREM3P0C091 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
FREM3P0C091 AL645939.2-201ENST00000427340 991 ntBASIC15.06■□□□□ 0
FREM3P0C091 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 SPCS2P1-201ENST00000561636 679 ntBASIC15.06■□□□□ 0
FREM3P0C091 SNHG9-202ENST00000564014 471 ntBASIC15.06■□□□□ 0
FREM3P0C091 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.06■□□□□ 0
FREM3P0C091 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.06■□□□□ 0
FREM3P0C091 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
FREM3P0C091 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.06■□□□□ 0
FREM3P0C091 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.05■□□□□ 0
FREM3P0C091 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.05■□□□□ 0
FREM3P0C091 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
FREM3P0C091 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.05■□□□□ 0
FREM3P0C091 AC005498.2-205ENST00000593218 784 ntBASIC15.05■□□□□ 0
FREM3P0C091 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
FREM3P0C091 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
FREM3P0C091 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
FREM3P0C091 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FREM3P0C091 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
FREM3P0C091 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.05■□□□□ -0
FREM3P0C091 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.05■□□□□ -0
FREM3P0C091 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.05■□□□□ -0
FREM3P0C091 GPS2P2-201ENST00000430745 888 ntBASIC15.05■□□□□ -0
FREM3P0C091 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.05■□□□□ -0
FREM3P0C091 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.05■□□□□ -0
FREM3P0C091 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.05■□□□□ -0
FREM3P0C091 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.05■□□□□ -0
FREM3P0C091 AC027307.2-201ENST00000591252 911 ntBASIC15.05■□□□□ -0
FREM3P0C091 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.05■□□□□ -0
FREM3P0C091 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.05■□□□□ -0
FREM3P0C091 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.05■□□□□ -0
FREM3P0C091 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
FREM3P0C091 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM3P0C091 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
FREM3P0C091 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
FREM3P0C091 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.04■□□□□ -0
FREM3P0C091 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms