Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 HMGA1P7-201ENST00000406908 502 ntBASIC15.6■□□□□ 0.09
PDGFAP04085 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 HLA-J-202ENST00000469281 1241 ntBASIC15.6■□□□□ 0.09
PDGFAP04085 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 LINC01225-203ENST00000563550 1244 ntBASIC15.6■□□□□ 0.09
PDGFAP04085 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 MIR4515-201ENST00000584082 81 ntBASIC15.6■□□□□ 0.09
PDGFAP04085 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 AL139327.4-201ENST00000612362 153 ntBASIC15.6■□□□□ 0.09
PDGFAP04085 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PDGFAP04085 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFAP04085 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFAP04085 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.59■□□□□ 0.09
PDGFAP04085 SPDYE14P-201ENST00000442619 822 ntBASIC15.59■□□□□ 0.09
PDGFAP04085 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PDGFAP04085 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 AC026150.2-201ENST00000564693 1156 ntBASIC15.59■□□□□ 0.09
PDGFAP04085 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.59■□□□□ 0.09
PDGFAP04085 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 AL390754.1-201ENST00000619088 582 ntBASIC15.59■□□□□ 0.09
PDGFAP04085 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDGFAP04085 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 AKAP8P1-201ENST00000434743 1349 ntBASIC15.59■□□□□ 0.09
PDGFAP04085 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFAP04085 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFAP04085 CROCCP1-201ENST00000426910 5675 ntBASIC15.59■□□□□ 0.09
PDGFAP04085 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
PDGFAP04085 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDGFAP04085 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PDGFAP04085 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDGFAP04085 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.58■□□□□ 0.08
PDGFAP04085 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms