Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT6AP02538 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
KRT6AP02538 KRT18P27-201ENST00000427733 1299 ntBASIC16.15■□□□□ 0.18
KRT6AP02538 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 RPS2P1-201ENST00000434010 821 ntBASIC16.15■□□□□ 0.18
KRT6AP02538 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT6AP02538 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT6AP02538 AC005412.3-201ENST00000580309 715 ntBASIC16.15■□□□□ 0.18
KRT6AP02538 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT6AP02538 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT6AP02538 MIR1199-201ENST00000621445 119 ntBASIC16.15■□□□□ 0.18
KRT6AP02538 AC012313.10-201ENST00000623509 926 ntBASIC16.15■□□□□ 0.18
KRT6AP02538 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 AL512652.2-201ENST00000625156 1716 ntBASIC16.14■□□□□ 0.17
KRT6AP02538 MTHFR-217ENST00000641820 1569 ntBASIC16.14■□□□□ 0.17
KRT6AP02538 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
KRT6AP02538 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.14■□□□□ 0.17
KRT6AP02538 AC087641.1-201ENST00000557561 1021 ntBASIC16.14■□□□□ 0.17
KRT6AP02538 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.14■□□□□ 0.17
KRT6AP02538 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 CYP2A7P1-201ENST00000595391 815 ntBASIC16.14■□□□□ 0.17
KRT6AP02538 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT6AP02538 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT6AP02538 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT6AP02538 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.13■□□□□ 0.17
KRT6AP02538 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT6AP02538 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
KRT6AP02538 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT6AP02538 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT6AP02538 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms