Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 LINC00982-205ENST00000420957 435 ntBASIC12.55□□□□□ -0.4
LTAP01374 TSPY5P-201ENST00000426936 936 ntBASIC12.55□□□□□ -0.4
LTAP01374 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.55□□□□□ -0.4
LTAP01374 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.55□□□□□ -0.4
LTAP01374 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.55□□□□□ -0.4
LTAP01374 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LTAP01374 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 AC023157.3-201ENST00000619086 2088 ntBASIC12.55□□□□□ -0.4
LTAP01374 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LTAP01374 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LTAP01374 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.54□□□□□ -0.4
LTAP01374 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LTAP01374 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.54□□□□□ -0.4
LTAP01374 RNF152P1-201ENST00000397754 604 ntBASIC12.54□□□□□ -0.4
LTAP01374 SPDYE21P-201ENST00000413323 827 ntBASIC12.54□□□□□ -0.4
LTAP01374 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 VENTXP7-201ENST00000475503 772 ntBASIC12.54□□□□□ -0.4
LTAP01374 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LTAP01374 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.54□□□□□ -0.4
LTAP01374 AL590326.2-201ENST00000625139 305 ntBASIC12.54□□□□□ -0.4
LTAP01374 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LTAP01374 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LTAP01374 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.54□□□□□ -0.4
LTAP01374 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.54□□□□□ -0.4
LTAP01374 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LTAP01374 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LTAP01374 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.53□□□□□ -0.4
LTAP01374 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 FAM45BP-202ENST00000592932 1624 ntBASIC12.53□□□□□ -0.4
LTAP01374 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LTAP01374 MIR648-201ENST00000385046 94 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms