Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFPL1O75677 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.71■□□□□ 0.27
RFPL1O75677 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RFPL1O75677 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.71■□□□□ 0.27
RFPL1O75677 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.71■□□□□ 0.27
RFPL1O75677 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.71■□□□□ 0.27
RFPL1O75677 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.71■□□□□ 0.27
RFPL1O75677 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.71■□□□□ 0.27
RFPL1O75677 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.71■□□□□ 0.27
RFPL1O75677 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RFPL1O75677 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
RFPL1O75677 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFPL1O75677 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFPL1O75677 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFPL1O75677 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFPL1O75677 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
RFPL1O75677 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 AP005117.1-201ENST00000584346 1413 ntBASIC16.7■□□□□ 0.26
RFPL1O75677 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.7■□□□□ 0.26
RFPL1O75677 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.7■□□□□ 0.26
RFPL1O75677 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.7■□□□□ 0.26
RFPL1O75677 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFPL1O75677 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFPL1O75677 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.7■□□□□ 0.26
RFPL1O75677 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.7■□□□□ 0.26
RFPL1O75677 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 HNRNPDP1-201ENST00000439535 754 ntBASIC16.7■□□□□ 0.26
RFPL1O75677 AC092183.1-201ENST00000469884 875 ntBASIC16.7■□□□□ 0.26
RFPL1O75677 BX005266.1-201ENST00000473402 457 ntBASIC16.7■□□□□ 0.26
RFPL1O75677 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.7■□□□□ 0.26
RFPL1O75677 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.7■□□□□ 0.26
RFPL1O75677 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.7■□□□□ 0.26
RFPL1O75677 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.7■□□□□ 0.26
RFPL1O75677 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 AC006449.6-201ENST00000612330 2296 ntBASIC16.7■□□□□ 0.26
RFPL1O75677 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFPL1O75677 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 AC002310.6-201ENST00000624451 1377 ntBASIC16.69■□□□□ 0.26
RFPL1O75677 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 PAWRP1-201ENST00000451083 565 ntBASIC16.69■□□□□ 0.26
RFPL1O75677 MPDU1-223ENST00000582151 728 ntBASIC16.69■□□□□ 0.26
RFPL1O75677 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 AC027601.4-201ENST00000611259 610 ntBASIC16.69■□□□□ 0.26
RFPL1O75677 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
RFPL1O75677 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFPL1O75677 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms