Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.64■□□□□ 0.57
ACTN4O43707 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 AL603832.2-201ENST00000566195 2125 ntBASIC18.64■□□□□ 0.57
ACTN4O43707 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 AC012569.1-201ENST00000591191 1524 ntBASIC18.64■□□□□ 0.57
ACTN4O43707 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ACTN4O43707 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.63■□□□□ 0.57
ACTN4O43707 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ACTN4O43707 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.63■□□□□ 0.57
ACTN4O43707 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
ACTN4O43707 POU5F1P6-201ENST00000466990 990 ntBASIC18.63■□□□□ 0.57
ACTN4O43707 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.63■□□□□ 0.57
ACTN4O43707 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.63■□□□□ 0.57
ACTN4O43707 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.63■□□□□ 0.57
ACTN4O43707 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ACTN4O43707 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ACTN4O43707 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.63■□□□□ 0.57
ACTN4O43707 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ACTN4O43707 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ACTN4O43707 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.63■□□□□ 0.57
ACTN4O43707 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN4O43707 AC008894.3-201ENST00000624324 3103 ntBASIC18.63■□□□□ 0.57
ACTN4O43707 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 RPS2P28-201ENST00000314255 741 ntBASIC18.62■□□□□ 0.57
ACTN4O43707 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
ACTN4O43707 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.62■□□□□ 0.57
ACTN4O43707 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 AL773604.1-201ENST00000617417 272 ntBASIC18.62■□□□□ 0.57
ACTN4O43707 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.62■□□□□ 0.57
ACTN4O43707 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.62■□□□□ 0.57
ACTN4O43707 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
ACTN4O43707 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACTN4O43707 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ACTN4O43707 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.61■□□□□ 0.57
ACTN4O43707 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ACTN4O43707 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ACTN4O43707 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ACTN4O43707 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACTN4O43707 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms