Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SOX1O00570 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.45■□□□□ 0.38
SOX1O00570 AC106760.1-201ENST00000508690 800 ntBASIC17.45■□□□□ 0.38
SOX1O00570 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.45■□□□□ 0.38
SOX1O00570 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SOX1O00570 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.45■□□□□ 0.38
SOX1O00570 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.45■□□□□ 0.38
SOX1O00570 AC018635.2-201ENST00000608625 364 ntBASIC17.45■□□□□ 0.38
SOX1O00570 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.45■□□□□ 0.38
SOX1O00570 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.45■□□□□ 0.38
SOX1O00570 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.45■□□□□ 0.38
SOX1O00570 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.45■□□□□ 0.38
SOX1O00570 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
SOX1O00570 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SOX1O00570 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SOX1O00570 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SOX1O00570 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SOX1O00570 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SOX1O00570 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SOX1O00570 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SOX1O00570 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.44■□□□□ 0.38
SOX1O00570 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.44■□□□□ 0.38
SOX1O00570 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.44■□□□□ 0.38
SOX1O00570 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.44■□□□□ 0.38
SOX1O00570 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.44■□□□□ 0.38
SOX1O00570 AL049840.4-201ENST00000602422 811 ntBASIC17.44■□□□□ 0.38
SOX1O00570 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.44■□□□□ 0.38
SOX1O00570 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SOX1O00570 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.44■□□□□ 0.38
SOX1O00570 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SOX1O00570 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SOX1O00570 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SOX1O00570 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SOX1O00570 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SOX1O00570 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SOX1O00570 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.43■□□□□ 0.38
SOX1O00570 FTLP1-201ENST00000449155 526 ntBASIC17.43■□□□□ 0.38
SOX1O00570 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.43■□□□□ 0.38
SOX1O00570 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.43■□□□□ 0.38
SOX1O00570 AC091812.3-201ENST00000621362 345 ntBASIC17.43■□□□□ 0.38
SOX1O00570 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.43■□□□□ 0.38
SOX1O00570 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SOX1O00570 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.43■□□□□ 0.38
SOX1O00570 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SOX1O00570 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SOX1O00570 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.42■□□□□ 0.38
SOX1O00570 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 SOCS2P1-201ENST00000417727 557 ntBASIC17.42■□□□□ 0.38
SOX1O00570 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms