Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 FAM86MP-201ENST00000340703 885 ntBASIC16.19■□□□□ 0.18
C4orf47A7E2U8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 AL079307.3-201ENST00000556114 283 ntBASIC16.19■□□□□ 0.18
C4orf47A7E2U8 MPDU1-223ENST00000582151 728 ntBASIC16.19■□□□□ 0.18
C4orf47A7E2U8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.19■□□□□ 0.18
C4orf47A7E2U8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AC234783.1-201ENST00000441761 496 ntBASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AC099568.2-201ENST00000609194 695 ntBASIC16.18■□□□□ 0.18
C4orf47A7E2U8 AC004790.1-201ENST00000612686 536 ntBASIC16.18■□□□□ 0.18
C4orf47A7E2U8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
C4orf47A7E2U8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 SLC7A15P-201ENST00000424028 1363 ntBASIC16.17■□□□□ 0.18
C4orf47A7E2U8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 FAM220BP-201ENST00000377689 816 ntBASIC16.17■□□□□ 0.18
C4orf47A7E2U8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 RN7SL618P-201ENST00000477850 296 ntBASIC16.17■□□□□ 0.18
C4orf47A7E2U8 ZNF890P-202ENST00000530367 1156 ntBASIC16.17■□□□□ 0.18
C4orf47A7E2U8 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.17■□□□□ 0.18
C4orf47A7E2U8 AP005482.1-201ENST00000563722 1273 ntBASIC16.17■□□□□ 0.18
C4orf47A7E2U8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms