Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 FAM220BP-201ENST00000377689 816 ntBASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 RNA5SP410-201ENST00000516285 106 ntBASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AP002490.2-201ENST00000524791 560 ntBASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 SNX33P1-201ENST00000592116 1762 ntBASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 MTND6P24-201ENST00000440466 518 ntBASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3BA6NDS4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 HLA-V-204ENST00000476601 1289 ntBASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms