Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC233702.3-201ENST00000578656 1387 ntBASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC016734.2-201ENST00000624325 1377 ntBASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 GGT4P-201ENST00000623672 1708 ntBASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 KRT18P1-202ENST00000452408 1331 ntBASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 BNIP3P18-201ENST00000593976 575 ntBASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AL121672.3-201ENST00000608644 468 ntBASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV5A0A0B4J249 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 PRAL-201ENST00000624952 3286 ntBASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 AC006449.6-201ENST00000612330 2296 ntBASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms