Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC187A0A096LP49 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 AC006277.1-201ENST00000624348 1610 ntBASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC187A0A096LP49 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 AP006294.1-201ENST00000415407 339 ntBASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 ARSEP1-201ENST00000420443 635 ntBASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC187A0A096LP49 LINC02012-201ENST00000608206 1725 ntBASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC187A0A096LP49 U91328.1-201ENST00000437528 223 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms