Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLCA3PQ9Y6N3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA3PQ9Y6N3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA3PQ9Y6N3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA3PQ9Y6N3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 PCDHA14-201ENST00000506751 2298 ntBASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 LINC02199-201ENST00000506655 2702 ntBASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 AC023274.1-201ENST00000418278 595 ntBASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 PGAM5P1-201ENST00000518923 814 ntBASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 DUX4L17-201ENST00000557360 1267 ntBASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 AC091167.2-201ENST00000579581 588 ntBASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA3PQ9Y6N3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 AP001350.2-201ENST00000625104 1094 ntBASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA3PQ9Y6N3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 AL513477.1-201ENST00000602865 2407 ntBASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 LINC00554-201ENST00000564841 3011 ntBASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 AC025580.3-201ENST00000617932 1424 ntBASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCA3PQ9Y6N3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCA3PQ9Y6N3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms