Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 SPDYE17-201ENST00000412399 783 ntBASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 MIR3615-201ENST00000581999 87 ntBASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCH2Q9Y6C5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC005229.1-201ENST00000392885 409 ntBASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 RNA5SP412-201ENST00000516234 123 ntBASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 SLC25A47P1-201ENST00000531577 414 ntBASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.57■□□□□ 0.56
PTCH2Q9Y6C5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC012317.2-201ENST00000623305 2251 ntBASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 CSF2RBP1-201ENST00000447905 391 ntBASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC092337.1-201ENST00000568699 1129 ntBASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 MIR6069-201ENST00000620069 79 ntBASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCH2Q9Y6C5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms