Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TREX1Q9NSU2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AL121894.2-201ENST00000602977 491 ntBASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AC023141.13-201ENST00000604991 943 ntBASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AC064836.3-201ENST00000607928 673 ntBASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.55■□□□□ 0.24
TREX1Q9NSU2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 IL9RP2-201ENST00000423948 1312 ntBASIC16.54■□□□□ 0.24
TREX1Q9NSU2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 AC022188.1-201ENST00000620960 1664 ntBASIC16.54■□□□□ 0.24
TREX1Q9NSU2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 KRT18P2-201ENST00000447938 1258 ntBASIC16.54■□□□□ 0.24
TREX1Q9NSU2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 RPL13AP23-201ENST00000480739 586 ntBASIC16.54■□□□□ 0.24
TREX1Q9NSU2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 AL009183.1-201ENST00000603760 355 ntBASIC16.54■□□□□ 0.24
TREX1Q9NSU2 AC007064.4-201ENST00000637740 555 ntBASIC16.54■□□□□ 0.24
TREX1Q9NSU2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TREX1Q9NSU2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms