Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 FAM197Y1-201ENST00000421178 764 ntBASIC14.16□□□□□ -0.14
GPN1Q9HCN4 CCR12P-201ENST00000446203 998 ntBASIC14.16□□□□□ -0.14
GPN1Q9HCN4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 AL021920.2-201ENST00000624828 1351 ntBASIC14.16□□□□□ -0.14
GPN1Q9HCN4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 CICP13-201ENST00000422015 2789 ntBASIC14.16□□□□□ -0.14
GPN1Q9HCN4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPN1Q9HCN4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AC097637.2-201ENST00000624096 1997 ntBASIC14.15□□□□□ -0.14
GPN1Q9HCN4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 NUDT16P1-203ENST00000513809 620 ntBASIC14.15□□□□□ -0.14
GPN1Q9HCN4 RNA5SP413-201ENST00000516373 109 ntBASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AC111152.3-201ENST00000569699 673 ntBASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 AC019129.2-201ENST00000609837 1235 ntBASIC14.15□□□□□ -0.14
GPN1Q9HCN4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.15□□□□□ -0.14
GPN1Q9HCN4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
GPN1Q9HCN4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.15□□□□□ -0.15
GPN1Q9HCN4 AC097374.2-201ENST00000618617 1306 ntBASIC14.15□□□□□ -0.15
GPN1Q9HCN4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPN1Q9HCN4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPN1Q9HCN4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPN1Q9HCN4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPN1Q9HCN4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms